Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga10g00602.F1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 566

Length: 944
ACGTcount: A:0.26, C:0.18, G:0.23, T:0.33


Found at i:794 original size:15 final size:15

Alignment explanation


    Indices: 771--801  Score: 53
    Period size: 15  Copynumber: 2.1  Consensus size: 15

        761 TGTTTTGGGC

                           
        771 TTGTAAATGGACTTT
          1 TTGTAAATGGACTTT

                *          
        786 TTGTTAATGGACTTT
          1 TTGTAAATGGACTTT

             
        801 T
          1 T

        802 ATTATTTTTA


Statistics
Matches: 15,  Mismatches: 1, Indels: 0
        0.94            0.06        0.00

Matches are distributed among these distances:
  15   15  1.00

ACGTcount: A:0.23, C:0.06, G:0.19, T:0.52


Consensus pattern (15 bp):   
TTGTAAATGGACTTT
Done.