Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga10g00602.F2

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 690

Length: 1150
ACGTcount: A:0.25, C:0.17, G:0.21, T:0.37


Found at i:1000 original size:15 final size:15

Alignment explanation


    Indices: 977--1007  Score: 53
    Period size: 15  Copynumber: 2.1  Consensus size: 15

        967 TGTTTTGGGC

                           
        977 TTGTAAATGGACTTT
          1 TTGTAAATGGACTTT

                *          
        992 TTGTTAATGGACTTT
          1 TTGTAAATGGACTTT

             
       1007 T
          1 T

       1008 ATTATTTTTA


Statistics
Matches: 15,  Mismatches: 1, Indels: 0
        0.94            0.06        0.00

Matches are distributed among these distances:
  15   15  1.00

ACGTcount: A:0.23, C:0.06, G:0.19, T:0.52


Consensus pattern (15 bp):   
TTGTAAATGGACTTT
Done.