Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga10g00955.N1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 525

Length: 875
ACGTcount: A:0.33, C:0.17, G:0.17, T:0.33


Found at i:515 original size:32 final size:32

Alignment explanation


    Indices: 474--536  Score: 126
    Period size: 32  Copynumber: 2.0  Consensus size: 32

        464 TTTGCAAGAG

                                            
        474 CTCGATCAAATTTTACACCATTAGCGACTATA
          1 CTCGATCAAATTTTACACCATTAGCGACTATA

                                           
        506 CTCGATCAAATTTTACACCATTAGCGACTAT
          1 CTCGATCAAATTTTACACCATTAGCGACTAT

        537 GTAATCACTG


Statistics
Matches: 31,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  32   31  1.00

ACGTcount: A:0.33, C:0.25, G:0.10, T:0.32


Consensus pattern (32 bp):   
CTCGATCAAATTTTACACCATTAGCGACTATA
Done.