Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga10g01043.N2

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 426

Length: 710
ACGTcount: A:0.26, C:0.13, G:0.26, T:0.35


Found at i:323 original size:3 final size:3

Alignment explanation


    Indices: 317--342  Score: 52
    Period size: 3  Copynumber: 8.7  Consensus size: 3

        307 GATGGATTAT

                                              
        317 GGA GGA GGA GGA GGA GGA GGA GGA GG
          1 GGA GGA GGA GGA GGA GGA GGA GGA GG

        343 CAACCGGATT


Statistics
Matches: 23,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   3   23  1.00

ACGTcount: A:0.31, C:0.00, G:0.69, T:0.00


Consensus pattern (3 bp):   
GGA

Done.