Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga10g01055.F2

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 801

Length: 1335
ACGTcount: A:0.32, C:0.16, G:0.20, T:0.33


Found at i:909 original size:21 final size:21

Alignment explanation


    Indices: 884--926  Score: 86
    Period size: 21  Copynumber: 2.0  Consensus size: 21

        874 GTACTAAGAG

                                 
        884 TCAGATTATAGTTTGTCCCTT
          1 TCAGATTATAGTTTGTCCCTT

                                 
        905 TCAGATTATAGTTTGTCCCTT
          1 TCAGATTATAGTTTGTCCCTT

             
        926 T
          1 T

        927 TACTCAAAAA


Statistics
Matches: 22,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  21   22  1.00

ACGTcount: A:0.19, C:0.19, G:0.14, T:0.49


Consensus pattern (21 bp):   
TCAGATTATAGTTTGTCCCTT
Done.