Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga10g01275.F2

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 802

Length: 1338
ACGTcount: A:0.27, C:0.19, G:0.20, T:0.33


Found at i:148 original size:6 final size:6

Alignment explanation


    Indices: 137--162  Score: 52
    Period size: 6  Copynumber: 4.3  Consensus size: 6

        127 ATATGTAACT

                                          
        137 TTTTAA TTTTAA TTTTAA TTTTAA TT
          1 TTTTAA TTTTAA TTTTAA TTTTAA TT

        163 GCAGAAAAGA


Statistics
Matches: 20,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   6   20  1.00

ACGTcount: A:0.31, C:0.00, G:0.00, T:0.69


Consensus pattern (6 bp):   
TTTTAA

Done.