Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga10g01430.F3

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 3944
ACGTcount: A:0.27, C:0.17, G:0.22, T:0.33


Found at i:1990 original size:12 final size:12

Alignment explanation


    Indices: 1973--1997  Score: 50
    Period size: 12  Copynumber: 2.1  Consensus size: 12

       1963 TGAACACTGC

                        
       1973 TGAAGCTGATGA
          1 TGAAGCTGATGA

                        
       1985 TGAAGCTGATGA
          1 TGAAGCTGATGA

             
       1997 T
          1 T

       1998 CCTGGTGCTC


Statistics
Matches: 13,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  12   13  1.00

ACGTcount: A:0.32, C:0.08, G:0.32, T:0.28


Consensus pattern (12 bp):   
TGAAGCTGATGA
Done.