Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga10g01456.F1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 887

Length: 1479
ACGTcount: A:0.27, C:0.18, G:0.22, T:0.33


Found at i:1394 original size:19 final size:19

Alignment explanation


    Indices: 1370--1407  Score: 76
    Period size: 19  Copynumber: 2.0  Consensus size: 19

       1360 TTGGGTGTGG

                               
       1370 ATTGGGATATTCGATTCAT
          1 ATTGGGATATTCGATTCAT

                               
       1389 ATTGGGATATTCGATTCAT
          1 ATTGGGATATTCGATTCAT

       1408 TCTTTTGGAT


Statistics
Matches: 19,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  19   19  1.00

ACGTcount: A:0.26, C:0.11, G:0.21, T:0.42


Consensus pattern (19 bp):   
ATTGGGATATTCGATTCAT
Done.