Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga10g01550.F1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 1941
ACGTcount: A:0.30, C:0.17, G:0.20, T:0.34


Found at i:54 original size:6 final size:6

Alignment explanation


    Indices: 42--88  Score: 67
    Period size: 6  Copynumber: 7.8  Consensus size: 6

         32 ACCCATACGA

                   *      *      *                                
         42 TCCCTT CCCCTT CCCCTT CCCCTT TCCCTT TCCCTT TCCCTT TCCCT
          1 TCCCTT TCCCTT TCCCTT TCCCTT TCCCTT TCCCTT TCCCTT TCCCT

         89 GGTTTTGAAA


Statistics
Matches: 39,  Mismatches: 2, Indels: 0
        0.95            0.05        0.00

Matches are distributed among these distances:
   6   39  1.00

ACGTcount: A:0.00, C:0.57, G:0.00, T:0.43


Consensus pattern (6 bp):   
TCCCTT

Done.