Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga10g01636.F1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 1807
ACGTcount: A:0.32, C:0.17, G:0.23, T:0.29


Found at i:1683 original size:11 final size:11

Alignment explanation


    Indices: 1667--1691  Score: 50
    Period size: 11  Copynumber: 2.3  Consensus size: 11

       1657 GAAGGGTCGA

                       
       1667 CTTTCACGTGC
          1 CTTTCACGTGC

                       
       1678 CTTTCACGTGC
          1 CTTTCACGTGC

               
       1689 CTT
          1 CTT

       1692 AGAGGAGAAA


Statistics
Matches: 14,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  11   14  1.00

ACGTcount: A:0.08, C:0.36, G:0.16, T:0.40


Consensus pattern (11 bp):   
CTTTCACGTGC
Done.