Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga10g01659.P1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 4181
ACGTcount: A:0.30, C:0.16, G:0.24, T:0.30


Found at i:3979 original size:1 final size:1

Alignment explanation


    Indices: 3975--4008  Score: 50
    Period size: 1  Copynumber: 34.0  Consensus size: 1

       3965 TTTTTTTTTT

                           *     *            
       3975 GGGGGGGGGGGGGGGTGGGGGTGGGGGGGGGGGG
          1 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG

       4009 TGTTGGGTTC


Statistics
Matches: 29,  Mismatches: 4, Indels: 0
        0.88            0.12        0.00

Matches are distributed among these distances:
   1   29  1.00

ACGTcount: A:0.00, C:0.00, G:0.94, T:0.06


Consensus pattern (1 bp):   
G

Done.