Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga10g01925.M1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 2531
ACGTcount: A:0.34, C:0.18, G:0.23, T:0.26


Found at i:2397 original size:13 final size:13

Alignment explanation


    Indices: 2364--2391  Score: 56
    Period size: 13  Copynumber: 2.2  Consensus size: 13

       2354 AACGCTCAAA

                         
       2364 ACGAAAAGTAATT
          1 ACGAAAAGTAATT

                         
       2377 ACGAAAAGTAATT
          1 ACGAAAAGTAATT

              
       2390 AC
          1 AC

       2392 TCAAAGAAAA


Statistics
Matches: 15,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  13   15  1.00

ACGTcount: A:0.54, C:0.11, G:0.14, T:0.21


Consensus pattern (13 bp):   
ACGAAAAGTAATT
Done.