Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga10g02048.F1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 379

Length: 633
ACGTcount: A:0.30, C:0.19, G:0.17, T:0.34


Found at i:16 original size:4 final size:4

Alignment explanation


    Indices: 8--40  Score: 66
    Period size: 4  Copynumber: 8.2  Consensus size: 4

          1 ACGCCTG

                                                     
          8 TTTC TTTC TTTC TTTC TTTC TTTC TTTC TTTC T
          1 TTTC TTTC TTTC TTTC TTTC TTTC TTTC TTTC T

         41 ATAATATCCC


Statistics
Matches: 29,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   4   29  1.00

ACGTcount: A:0.00, C:0.24, G:0.00, T:0.76


Consensus pattern (4 bp):   
TTTC

Done.