Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga10g02063.N1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 432

Length: 720
ACGTcount: A:0.31, C:0.20, G:0.23, T:0.26


Found at i:329 original size:15 final size:15

Alignment explanation


    Indices: 309--339  Score: 62
    Period size: 15  Copynumber: 2.1  Consensus size: 15

        299 CATTTTCTGG

                           
        309 TCAAGAGGGTTTAAA
          1 TCAAGAGGGTTTAAA

                           
        324 TCAAGAGGGTTTAAA
          1 TCAAGAGGGTTTAAA

             
        339 T
          1 T

        340 GAACTCAGGA


Statistics
Matches: 16,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  15   16  1.00

ACGTcount: A:0.39, C:0.06, G:0.26, T:0.29


Consensus pattern (15 bp):   
TCAAGAGGGTTTAAA
Done.