Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga10g02187.F3

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 842

Length: 1404
ACGTcount: A:0.29, C:0.19, G:0.21, T:0.31


Found at i:128 original size:10 final size:11

Alignment explanation


    Indices: 107--132  Score: 52
    Period size: 11  Copynumber: 2.4  Consensus size: 11

         97 GCTGATTTGC

                       
        107 TTTTGAATTTT
          1 TTTTGAATTTT

                       
        118 TTTTGAATTTT
          1 TTTTGAATTTT

                
        129 TTTT
          1 TTTT

        133 CGAGATTTAC


Statistics
Matches: 15,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  11   15  1.00

ACGTcount: A:0.15, C:0.00, G:0.08, T:0.77


Consensus pattern (11 bp):   
TTTTGAATTTT
Done.