Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga10g02195.F1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 810

Length: 1350
ACGTcount: A:0.32, C:0.23, G:0.18, T:0.27


Found at i:1005 original size:17 final size:17

Alignment explanation


    Indices: 980--1013  Score: 50
    Period size: 17  Copynumber: 2.0  Consensus size: 17

        970 CAGATGGAGT

                *            
        980 ACATTGATACCATCATC
          1 ACATCGATACCATCATC

                       *     
        997 ACATCGATACCCTCATC
          1 ACATCGATACCATCATC

       1014 TTCATCATCA


Statistics
Matches: 15,  Mismatches: 2, Indels: 0
        0.88            0.12        0.00

Matches are distributed among these distances:
  17   15  1.00

ACGTcount: A:0.32, C:0.35, G:0.06, T:0.26


Consensus pattern (17 bp):   
ACATCGATACCATCATC
Done.