Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga10g02290.F3

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 1822
ACGTcount: A:0.30, C:0.19, G:0.20, T:0.30


Found at i:856 original size:15 final size:15

Alignment explanation


    Indices: 836--867  Score: 64
    Period size: 15  Copynumber: 2.1  Consensus size: 15

        826 TACTGTGAAG

                           
        836 ACTTTAACTTATTTT
          1 ACTTTAACTTATTTT

                           
        851 ACTTTAACTTATTTT
          1 ACTTTAACTTATTTT

              
        866 AC
          1 AC

        868 AAATACTAAC


Statistics
Matches: 17,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  15   17  1.00

ACGTcount: A:0.28, C:0.16, G:0.00, T:0.56


Consensus pattern (15 bp):   
ACTTTAACTTATTTT
Done.