Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga10g02294.F1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 826

Length: 1378
ACGTcount: A:0.33, C:0.19, G:0.17, T:0.32


Found at i:1238 original size:16 final size:16

Alignment explanation


    Indices: 1217--1247  Score: 53
    Period size: 16  Copynumber: 1.9  Consensus size: 16

       1207 ATTTCCTAAT

                     *      
       1217 AATAATTAATTAATGC
          1 AATAATTAAATAATGC

                           
       1233 AATAATTAAATAATG
          1 AATAATTAAATAATG

       1248 AATTTTCCTA


Statistics
Matches: 14,  Mismatches: 1, Indels: 0
        0.93            0.07        0.00

Matches are distributed among these distances:
  16   14  1.00

ACGTcount: A:0.55, C:0.03, G:0.06, T:0.35


Consensus pattern (16 bp):   
AATAATTAAATAATGC
Done.