Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga10g02306.F2

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 3275
ACGTcount: A:0.26, C:0.21, G:0.23, T:0.30


Found at i:315 original size:6 final size:6

Alignment explanation


    Indices: 304--330  Score: 54
    Period size: 6  Copynumber: 4.5  Consensus size: 6

        294 TCTCCCTAAA

                                           
        304 CCCCAC CCCCAC CCCCAC CCCCAC CCC
          1 CCCCAC CCCCAC CCCCAC CCCCAC CCC

        331 TACTCCAACT


Statistics
Matches: 21,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   6   21  1.00

ACGTcount: A:0.15, C:0.85, G:0.00, T:0.00


Consensus pattern (6 bp):   
CCCCAC

Done.