Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga10g02474.N2

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 1795
ACGTcount: A:0.29, C:0.21, G:0.18, T:0.32


Found at i:1727 original size:12 final size:12

Alignment explanation


    Indices: 1710--1734  Score: 50
    Period size: 12  Copynumber: 2.1  Consensus size: 12

       1700 TGTACTAGAC

                        
       1710 TGTTTTTTTTTT
          1 TGTTTTTTTTTT

                        
       1722 TGTTTTTTTTTT
          1 TGTTTTTTTTTT

             
       1734 T
          1 T

       1735 TAATTTTCTC


Statistics
Matches: 13,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  12   13  1.00

ACGTcount: A:0.00, C:0.00, G:0.08, T:0.92


Consensus pattern (12 bp):   
TGTTTTTTTTTT
Done.