Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga10g02537.F1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 855

Length: 1426
ACGTcount: A:0.30, C:0.22, G:0.22, T:0.26


Found at i:940 original size:18 final size:18

Alignment explanation


    Indices: 917--955  Score: 69
    Period size: 18  Copynumber: 2.2  Consensus size: 18

        907 CTGCTCCAGC

                              
        917 AAAGGACGCTAAAGATGG
          1 AAAGGACGCTAAAGATGG

                  *           
        935 AAAGGATGCTAAAGATGG
          1 AAAGGACGCTAAAGATGG

               
        953 AAA
          1 AAA

        956 AGACTCGAAA


Statistics
Matches: 20,  Mismatches: 1, Indels: 0
        0.95            0.05        0.00

Matches are distributed among these distances:
  18   20  1.00

ACGTcount: A:0.49, C:0.08, G:0.31, T:0.13


Consensus pattern (18 bp):   
AAAGGACGCTAAAGATGG
Done.