Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga10g02612.N1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 235

Length: 393
ACGTcount: A:0.21, C:0.17, G:0.33, T:0.28


Found at i:196 original size:35 final size:35

Alignment explanation


    Indices: 150--216  Score: 134
    Period size: 35  Copynumber: 1.9  Consensus size: 35

        140 GTGTGTGATA

                                               
        150 GTGCTGGTGGCAGACAGCATGGGAGAGTGGGAGTG
          1 GTGCTGGTGGCAGACAGCATGGGAGAGTGGGAGTG

                                            
        185 GTGCTGGTGGCAGACAGCATGGGAGAGTGGGA
          1 GTGCTGGTGGCAGACAGCATGGGAGAGTGGGA

        217 AGAGGCAAGT


Statistics
Matches: 32,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  35   32  1.00

ACGTcount: A:0.21, C:0.12, G:0.51, T:0.16


Consensus pattern (35 bp):   
GTGCTGGTGGCAGACAGCATGGGAGAGTGGGAGTG
Done.