Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga10g02687.N1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 4361
ACGTcount: A:0.31, C:0.17, G:0.18, T:0.34


Found at i:1263 original size:14 final size:14

Alignment explanation


    Indices: 1244--1271  Score: 56
    Period size: 14  Copynumber: 2.0  Consensus size: 14

       1234 CACTAAAAAA

                          
       1244 TTAATTTCTTTTTC
          1 TTAATTTCTTTTTC

                          
       1258 TTAATTTCTTTTTC
          1 TTAATTTCTTTTTC

       1272 CTGATTGTTG


Statistics
Matches: 14,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  14   14  1.00

ACGTcount: A:0.14, C:0.14, G:0.00, T:0.71


Consensus pattern (14 bp):   
TTAATTTCTTTTTC
Done.