Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga10g02718.F1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 860

Length: 1434
ACGTcount: A:0.29, C:0.19, G:0.23, T:0.29


Found at i:18 original size:6 final size:6

Alignment explanation


    Indices: 8--34  Score: 54
    Period size: 6  Copynumber: 4.5  Consensus size: 6

          1 AACGACT

                                           
          8 GAGTCC GAGTCC GAGTCC GAGTCC GAG
          1 GAGTCC GAGTCC GAGTCC GAGTCC GAG

         35 CTTGAGACTG


Statistics
Matches: 21,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   6   21  1.00

ACGTcount: A:0.19, C:0.30, G:0.37, T:0.15


Consensus pattern (6 bp):   
GAGTCC

Done.