Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga10g02759.P1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 8091
ACGTcount: A:0.31, C:0.20, G:0.20, T:0.29


Found at i:7457 original size:12 final size:12

Alignment explanation


    Indices: 7440--7464  Score: 50
    Period size: 12  Copynumber: 2.1  Consensus size: 12

       7430 AGCAAACCAG

                        
       7440 GAAATTTGCTTC
          1 GAAATTTGCTTC

                        
       7452 GAAATTTGCTTC
          1 GAAATTTGCTTC

             
       7464 G
          1 G

       7465 TAAAAAGAAA


Statistics
Matches: 13,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  12   13  1.00

ACGTcount: A:0.24, C:0.16, G:0.20, T:0.40


Consensus pattern (12 bp):   
GAAATTTGCTTC
Done.