Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga10g02759.F6

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 4950
ACGTcount: A:0.27, C:0.19, G:0.21, T:0.33


Found at i:1430 original size:19 final size:19

Alignment explanation


    Indices: 1406--1443  Score: 58
    Period size: 19  Copynumber: 2.0  Consensus size: 19

       1396 ACCCTGATTG

                          *    
       1406 TCTTCCACAAATGTTTTGA
          1 TCTTCCACAAATGTCTTGA

                    *          
       1425 TCTTCCACGAATGTCTTGA
          1 TCTTCCACAAATGTCTTGA

       1444 CATTAGGCAA


Statistics
Matches: 17,  Mismatches: 2, Indels: 0
        0.89            0.11        0.00

Matches are distributed among these distances:
  19   17  1.00

ACGTcount: A:0.24, C:0.24, G:0.13, T:0.39


Consensus pattern (19 bp):   
TCTTCCACAAATGTCTTGA
Done.