Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga11g00120.F1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 880

Length: 1468
ACGTcount: A:0.31, C:0.17, G:0.23, T:0.29


Found at i:1382 original size:6 final size:6

Alignment explanation


    Indices: 1371--1398  Score: 56
    Period size: 6  Copynumber: 4.7  Consensus size: 6

       1361 AATTTGTATT

                                            
       1371 GTGTAC GTGTAC GTGTAC GTGTAC GTGT
          1 GTGTAC GTGTAC GTGTAC GTGTAC GTGT

       1399 GTGTATGTTA


Statistics
Matches: 22,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   6   22  1.00

ACGTcount: A:0.14, C:0.14, G:0.36, T:0.36


Consensus pattern (6 bp):   
GTGTAC

Done.