Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga11g00363.F2

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 4912
ACGTcount: A:0.32, C:0.18, G:0.23, T:0.27


Found at i:4824 original size:12 final size:13

Alignment explanation


    Indices: 4802--4829  Score: 56
    Period size: 13  Copynumber: 2.2  Consensus size: 13

       4792 TAACTTCTCA

                         
       4802 TTTGTTTTTTTTT
          1 TTTGTTTTTTTTT

                         
       4815 TTTGTTTTTTTTT
          1 TTTGTTTTTTTTT

              
       4828 TT
          1 TT

       4830 CGAGTGCATA


Statistics
Matches: 15,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  13   15  1.00

ACGTcount: A:0.00, C:0.00, G:0.07, T:0.93


Consensus pattern (13 bp):   
TTTGTTTTTTTTT
Done.