Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga02g00118.F3

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 3887
ACGTcount: A:0.31, C:0.17, G:0.20, T:0.32


Found at i:98 original size:3 final size:3

Alignment explanation


    Indices: 92--119  Score: 56
    Period size: 3  Copynumber: 9.3  Consensus size: 3

         82 TTCTTCTTCT

                                                 
         92 TCA TCA TCA TCA TCA TCA TCA TCA TCA T
          1 TCA TCA TCA TCA TCA TCA TCA TCA TCA T

        120 GTATATATAT


Statistics
Matches: 25,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   3   25  1.00

ACGTcount: A:0.32, C:0.32, G:0.00, T:0.36


Consensus pattern (3 bp):   
TCA

Done.