Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga01g00318.F1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 514

Length: 857
ACGTcount: A:0.29, C:0.16, G:0.16, T:0.40


Found at i:42 original size:14 final size:14

Alignment explanation


    Indices: 23--51  Score: 58
    Period size: 14  Copynumber: 2.1  Consensus size: 14

         13 TTTTCTCTTT

                          
         23 TCTTCGAAATTTTC
          1 TCTTCGAAATTTTC

                          
         37 TCTTCGAAATTTTC
          1 TCTTCGAAATTTTC

             
         51 T
          1 T

         52 GTAGAAATTG


Statistics
Matches: 15,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  14   15  1.00

ACGTcount: A:0.21, C:0.21, G:0.07, T:0.52


Consensus pattern (14 bp):   
TCTTCGAAATTTTC
Done.