Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga02g00254.F4

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 991

Length: 1652
ACGTcount: A:0.29, C:0.19, G:0.20, T:0.32


Found at i:70 original size:6 final size:6

Alignment explanation


    Indices: 59--87  Score: 58
    Period size: 6  Copynumber: 4.8  Consensus size: 6

         49 CTCTCTTCAC

                                             
         59 CACCAT CACCAT CACCAT CACCAT CACCA
          1 CACCAT CACCAT CACCAT CACCAT CACCA

         88 CCGCCCCCGT


Statistics
Matches: 23,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   6   23  1.00

ACGTcount: A:0.34, C:0.52, G:0.00, T:0.14


Consensus pattern (6 bp):   
CACCAT

Done.