Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga11g01530.N1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 2151
ACGTcount: A:0.30, C:0.19, G:0.19, T:0.31


Found at i:1458 original size:6 final size:6

Alignment explanation


    Indices: 1447--1486  Score: 80
    Period size: 6  Copynumber: 6.7  Consensus size: 6

       1437 CATGGAGGAG

                                                          
       1447 GGTGTT GGTGTT GGTGTT GGTGTT GGTGTT GGTGTT GGTG
          1 GGTGTT GGTGTT GGTGTT GGTGTT GGTGTT GGTGTT GGTG

       1487 AAAAGTGGAA


Statistics
Matches: 34,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   6   34  1.00

ACGTcount: A:0.00, C:0.00, G:0.53, T:0.47


Consensus pattern (6 bp):   
GGTGTT

Done.