Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga11g01632.F3

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 876

Length: 1460
ACGTcount: A:0.28, C:0.21, G:0.22, T:0.30


Found at i:18 original size:3 final size:3

Alignment explanation


    Indices: 1--42  Score: 57
    Period size: 3  Copynumber: 14.0  Consensus size: 3

                     *   *                              *          
          1 ACC ACC ATC ATC ACC ACC ACC ACC ACC ACC ACC GCC ACC ACC
          1 ACC ACC ACC ACC ACC ACC ACC ACC ACC ACC ACC ACC ACC ACC

         43 GTCTTAGCCT


Statistics
Matches: 35,  Mismatches: 4, Indels: 0
        0.90            0.10        0.00

Matches are distributed among these distances:
   3   35  1.00

ACGTcount: A:0.31, C:0.62, G:0.02, T:0.05


Consensus pattern (3 bp):   
ACC

Done.