Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga02g00267.F1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 574

Length: 957
ACGTcount: A:0.27, C:0.17, G:0.22, T:0.34


Found at i:774 original size:7 final size:7

Alignment explanation


    Indices: 762--787  Score: 52
    Period size: 7  Copynumber: 3.7  Consensus size: 7

        752 CGTGTTTTGA

                   
        762 GGTTTTC
          1 GGTTTTC

                   
        769 GGTTTTC
          1 GGTTTTC

                   
        776 GGTTTTC
          1 GGTTTTC

                 
        783 GGTTT
          1 GGTTT

        788 CTCCCTAACT


Statistics
Matches: 19,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   7   19  1.00

ACGTcount: A:0.00, C:0.12, G:0.31, T:0.58


Consensus pattern (7 bp):   
GGTTTTC
Done.