Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga11g01856.F1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 547

Length: 913
ACGTcount: A:0.29, C:0.16, G:0.20, T:0.35


Found at i:528 original size:10 final size:10

Alignment explanation


    Indices: 513--542  Score: 51
    Period size: 10  Copynumber: 3.0  Consensus size: 10

        503 TCTGCTGTGA

                      
        513 GTTGTTTTCT
          1 GTTGTTTTCT

                      
        523 GTTGTTTTCT
          1 GTTGTTTTCT

               *      
        533 GTTATTTTCT
          1 GTTGTTTTCT

        543 TCTCGCAGGT


Statistics
Matches: 19,  Mismatches: 1, Indels: 0
        0.95            0.05        0.00

Matches are distributed among these distances:
  10   19  1.00

ACGTcount: A:0.03, C:0.10, G:0.17, T:0.70


Consensus pattern (10 bp):   
GTTGTTTTCT
Done.