Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga11g01857.P1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 1808
ACGTcount: A:0.30, C:0.16, G:0.13, T:0.41


Found at i:147 original size:10 final size:10

Alignment explanation


    Indices: 132--161  Score: 51
    Period size: 10  Copynumber: 3.0  Consensus size: 10

        122 ACCTGCGAGA

                  *   
        132 AGAAAATAAC
          1 AGAAAACAAC

                      
        142 AGAAAACAAC
          1 AGAAAACAAC

                      
        152 AGAAAACAAC
          1 AGAAAACAAC

        162 TCACAGCAGA


Statistics
Matches: 19,  Mismatches: 1, Indels: 0
        0.95            0.05        0.00

Matches are distributed among these distances:
  10   19  1.00

ACGTcount: A:0.70, C:0.17, G:0.10, T:0.03


Consensus pattern (10 bp):   
AGAAAACAAC
Done.