Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga11g02015.F5

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 3726
ACGTcount: A:0.28, C:0.16, G:0.17, T:0.38


Found at i:1102 original size:3 final size:3

Alignment explanation


    Indices: 1094--1124  Score: 62
    Period size: 3  Copynumber: 10.3  Consensus size: 3

       1084 AGCAACTGCA

                                                     
       1094 GAT GAT GAT GAT GAT GAT GAT GAT GAT GAT G
          1 GAT GAT GAT GAT GAT GAT GAT GAT GAT GAT G

       1125 GAGCTCCAAC


Statistics
Matches: 28,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   3   28  1.00

ACGTcount: A:0.32, C:0.00, G:0.35, T:0.32


Consensus pattern (3 bp):   
GAT

Done.