Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga11g02053.F7

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 3817
ACGTcount: A:0.30, C:0.18, G:0.23, T:0.29


Found at i:1843 original size:1 final size:1

Alignment explanation

Indices: 1794--1825 Score: 64 Period size: 1 Copynumber: 32.0 Consensus size: 1 1784 TTTGCTTTGG 1794 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1826 GCAAAGAACT Statistics Matches: 31, Mismatches: 0, Indels: 0 1.00 0.00 0.00 Matches are distributed among these distances: 1 31 1.00 ACGTcount: A:0.00, C:0.00, G:0.00, T:1.00 Consensus pattern (1 bp): T Done.