Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga11g02325.F3

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 6005
ACGTcount: A:0.30, C:0.17, G:0.22, T:0.31


Found at i:5666 original size:13 final size:13

Alignment explanation


    Indices: 5648--5672  Score: 50
    Period size: 13  Copynumber: 1.9  Consensus size: 13

       5638 CCCTCTTCAT

                         
       5648 ATATATATATATG
          1 ATATATATATATG

                        
       5661 ATATATATATAT
          1 ATATATATATAT

       5673 TTGAATACAT


Statistics
Matches: 12,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  13   12  1.00

ACGTcount: A:0.48, C:0.00, G:0.04, T:0.48


Consensus pattern (13 bp):   
ATATATATATATG
Done.