Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga11g02449.P2

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 662

Length: 1104
ACGTcount: A:0.30, C:0.15, G:0.20, T:0.35


Found at i:1036 original size:12 final size:12

Alignment explanation


    Indices: 1019--1046  Score: 56
    Period size: 12  Copynumber: 2.3  Consensus size: 12

       1009 AATTTAAATG

                        
       1019 TATTAAATTACA
          1 TATTAAATTACA

                        
       1031 TATTAAATTACA
          1 TATTAAATTACA

                
       1043 TATT
          1 TATT

       1047 GAATCAATGT


Statistics
Matches: 16,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  12   16  1.00

ACGTcount: A:0.46, C:0.07, G:0.00, T:0.46


Consensus pattern (12 bp):   
TATTAAATTACA
Done.