Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga11g02610.F1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 782

Length: 1304
ACGTcount: A:0.28, C:0.22, G:0.20, T:0.30


Found at i:69 original size:3 final size:3

Alignment explanation


    Indices: 61--95  Score: 70
    Period size: 3  Copynumber: 11.7  Consensus size: 3

         51 AAACAAAGCA

                                                          
         61 TTC TTC TTC TTC TTC TTC TTC TTC TTC TTC TTC TT
          1 TTC TTC TTC TTC TTC TTC TTC TTC TTC TTC TTC TT

         96 TTTTTCTGTG


Statistics
Matches: 32,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   3   32  1.00

ACGTcount: A:0.00, C:0.31, G:0.00, T:0.69


Consensus pattern (3 bp):   
TTC

Done.