Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga11g02732.F3

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 3520
ACGTcount: A:0.29, C:0.16, G:0.23, T:0.32


Found at i:202 original size:16 final size:16

Alignment explanation


    Indices: 183--213  Score: 62
    Period size: 16  Copynumber: 1.9  Consensus size: 16

        173 CTGGGGGATT

                            
        183 TTTTTTTTGTGTTTTA
          1 TTTTTTTTGTGTTTTA

                           
        199 TTTTTTTTGTGTTTT
          1 TTTTTTTTGTGTTTT

        214 GACAGTGCCT


Statistics
Matches: 15,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  16   15  1.00

ACGTcount: A:0.03, C:0.00, G:0.13, T:0.84


Consensus pattern (16 bp):   
TTTTTTTTGTGTTTTA
Done.