Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga11g02811.F1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 580

Length: 967
ACGTcount: A:0.37, C:0.12, G:0.14, T:0.37


Found at i:435 original size:15 final size:15

Alignment explanation


    Indices: 417--446  Score: 51
    Period size: 15  Copynumber: 2.0  Consensus size: 15

        407 AAGATTATAT

                           
        417 ATTTCAAAATTATGA
          1 ATTTCAAAATTATGA

                    *      
        432 ATTTCAAATTTATGA
          1 ATTTCAAAATTATGA

        447 TTATTGATTG


Statistics
Matches: 14,  Mismatches: 1, Indels: 0
        0.93            0.07        0.00

Matches are distributed among these distances:
  15   14  1.00

ACGTcount: A:0.43, C:0.07, G:0.07, T:0.43


Consensus pattern (15 bp):   
ATTTCAAAATTATGA
Done.