Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga11g03075.P2

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 6905
ACGTcount: A:0.29, C:0.20, G:0.19, T:0.32


Found at i:5494 original size:11 final size:14

Alignment explanation


    Indices: 5462--5494  Score: 66
    Period size: 14  Copynumber: 2.4  Consensus size: 14

       5452 TTGAAGAATG

                          
       5462 ATATTATTGTAATT
          1 ATATTATTGTAATT

                          
       5476 ATATTATTGTAATT
          1 ATATTATTGTAATT

                 
       5490 ATATT
          1 ATATT

       5495 TGTATATATT


Statistics
Matches: 19,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  14   19  1.00

ACGTcount: A:0.36, C:0.00, G:0.06, T:0.58


Consensus pattern (14 bp):   
ATATTATTGTAATT
Done.