Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga01g00023.F3

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 833

Length: 1389
ACGTcount: A:0.28, C:0.19, G:0.24, T:0.29


Found at i:128 original size:26 final size:26

Alignment explanation


    Indices: 96--147  Score: 104
    Period size: 26  Copynumber: 2.0  Consensus size: 26

         86 TTTGTCTCTC

                                      
         96 CTTCAATAGATTTAAGTGTTTCCCTT
          1 CTTCAATAGATTTAAGTGTTTCCCTT

                                      
        122 CTTCAATAGATTTAAGTGTTTCCCTT
          1 CTTCAATAGATTTAAGTGTTTCCCTT

        148 TCTTTGGGGG


Statistics
Matches: 26,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  26   26  1.00

ACGTcount: A:0.23, C:0.19, G:0.12, T:0.46


Consensus pattern (26 bp):   
CTTCAATAGATTTAAGTGTTTCCCTT
Done.