Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga11g03383.C1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 3228
ACGTcount: A:0.29, C:0.23, G:0.21, T:0.27


Found at i:2900 original size:4 final size:4

Alignment explanation


    Indices: 2891--2917  Score: 54
    Period size: 4  Copynumber: 6.8  Consensus size: 4

       2881 TATACCAAAT

                                             
       2891 ATAC ATAC ATAC ATAC ATAC ATAC ATA
          1 ATAC ATAC ATAC ATAC ATAC ATAC ATA

       2918 TATAAACATT


Statistics
Matches: 23,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   4   23  1.00

ACGTcount: A:0.52, C:0.22, G:0.00, T:0.26


Consensus pattern (4 bp):   
ATAC

Done.