Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga11g03770.M1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 2895
ACGTcount: A:0.30, C:0.19, G:0.21, T:0.30


Found at i:1293 original size:4 final size:4

Alignment explanation


    Indices: 1279--1319  Score: 73
    Period size: 4  Copynumber: 10.2  Consensus size: 4

       1269 AATGTATGAC

                 *                                             
       1279 TACA AACA TACA TACA TACA TACA TACA TACA TACA TACA T
          1 TACA TACA TACA TACA TACA TACA TACA TACA TACA TACA T

       1320 CAAGGAACAT


Statistics
Matches: 35,  Mismatches: 2, Indels: 0
        0.95            0.05        0.00

Matches are distributed among these distances:
   4   35  1.00

ACGTcount: A:0.51, C:0.24, G:0.00, T:0.24


Consensus pattern (4 bp):   
TACA

Done.