Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga11g03770.F6

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 2665
ACGTcount: A:0.28, C:0.18, G:0.21, T:0.34


Found at i:2542 original size:4 final size:4

Alignment explanation


    Indices: 2528--2568  Score: 73
    Period size: 4  Copynumber: 10.2  Consensus size: 4

       2518 AATGTATGAC

                 *                                             
       2528 TACA AACA TACA TACA TACA TACA TACA TACA TACA TACA T
          1 TACA TACA TACA TACA TACA TACA TACA TACA TACA TACA T

       2569 CAAGGAACAT


Statistics
Matches: 35,  Mismatches: 2, Indels: 0
        0.95            0.05        0.00

Matches are distributed among these distances:
   4   35  1.00

ACGTcount: A:0.51, C:0.24, G:0.00, T:0.24


Consensus pattern (4 bp):   
TACA

Done.