Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga12g00179.F2

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 633

Length: 1056
ACGTcount: A:0.28, C:0.17, G:0.25, T:0.31


Found at i:1007 original size:13 final size:13

Alignment explanation


    Indices: 989--1013  Score: 50
    Period size: 13  Copynumber: 1.9  Consensus size: 13

        979 AAGATTAATG

                         
        989 TGTATATATACGA
          1 TGTATATATACGA

                        
       1002 TGTATATATACG
          1 TGTATATATACG

       1014 TCATAACTTC


Statistics
Matches: 12,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  13   12  1.00

ACGTcount: A:0.36, C:0.08, G:0.16, T:0.40


Consensus pattern (13 bp):   
TGTATATATACGA
Done.