Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga01g00023.P1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 919

Length: 1533
ACGTcount: A:0.27, C:0.18, G:0.22, T:0.32


Found at i:412 original size:26 final size:26

Alignment explanation


    Indices: 380--431  Score: 104
    Period size: 26  Copynumber: 2.0  Consensus size: 26

        370 TTTGTCTCTC

                                      
        380 CTTCAATAGATTTAAGTGTTTCCCTT
          1 CTTCAATAGATTTAAGTGTTTCCCTT

                                      
        406 CTTCAATAGATTTAAGTGTTTCCCTT
          1 CTTCAATAGATTTAAGTGTTTCCCTT

        432 TCTTTGGGGG


Statistics
Matches: 26,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  26   26  1.00

ACGTcount: A:0.23, C:0.19, G:0.12, T:0.46


Consensus pattern (26 bp):   
CTTCAATAGATTTAAGTGTTTCCCTT
Done.